Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox17Q61473 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox17Q61473 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Mir874-201ENSMUST00000104769 76 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Gm6912-201ENSMUST00000117218 544 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Sox17Q61473 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox17Q61473 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox17Q61473 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Sox17Q61473 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox17Q61473 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox17Q61473 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox17Q61473 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.4□□□□□ -0.42
Sox17Q61473 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox17Q61473 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox17Q61473 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sox17Q61473 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sox17Q61473 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.43
Sox17Q61473 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Gm24543-201ENSMUST00000103867 82 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox17Q61473 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox17Q61473 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Mir7221-201ENSMUST00000184009 72 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox17Q61473 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox17Q61473 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.39□□□□□ -0.43
Sox17Q61473 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Sox17Q61473 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox17Q61473 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox17Q61473 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox17Q61473 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms