Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.11□□□□□ -0.31
Scn2bQ56A07 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gm45841-201ENSMUST00000207700 164 ntBASIC13.11□□□□□ -0.31
Scn2bQ56A07 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gm9797-201ENSMUST00000052902 613 ntBASIC13.11□□□□□ -0.31
Scn2bQ56A07 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn2bQ56A07 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.1□□□□□ -0.31
Scn2bQ56A07 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm17330-201ENSMUST00000221047 165 ntBASIC13.1□□□□□ -0.31
Scn2bQ56A07 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gm2423-201ENSMUST00000074863 733 ntBASIC13.1□□□□□ -0.31
Scn2bQ56A07 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn2bQ56A07 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms