Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm26464-201ENSMUST00000157094 305 ntBASIC14.09□□□□□ -0.15
Syne3Q4FZC9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.09□□□□□ -0.15
Syne3Q4FZC9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Syne3Q4FZC9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.08□□□□□ -0.16
Syne3Q4FZC9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne3Q4FZC9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm14928-201ENSMUST00000120198 477 ntBASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne3Q4FZC9 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms