Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Gm25927-201ENSMUST00000175058 117 ntBASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.25■□□□□ 0.03
Pls1Q3V0K9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.25■□□□□ 0.03
Pls1Q3V0K9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pls1Q3V0K9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Gm2231-201ENSMUST00000125661 612 ntBASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pls1Q3V0K9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Gm27516-201ENSMUST00000184237 98 ntBASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Gm42627-201ENSMUST00000197347 224 ntBASIC15.22■□□□□ 0.03
Pls1Q3V0K9 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms