Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm13408-201ENSMUST00000119822 798 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm12266-201ENSMUST00000120311 962 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm13935-201ENSMUST00000121859 798 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm17040-202ENSMUST00000170597 889 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gm8913-201ENSMUST00000209491 641 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.26□□□□□ -0.29
Fam196aQ3USH1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fam196aQ3USH1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm13875-201ENSMUST00000120162 282 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm45433-201ENSMUST00000209386 247 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm18730-201ENSMUST00000218038 343 ntBASIC13.25□□□□□ -0.29
Fam196aQ3USH1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.25□□□□□ -0.29
Fam196aQ3USH1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms