Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Puf60Q3UEB3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm16570-201ENSMUST00000161951 436 ntBASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm18916-201ENSMUST00000198264 1246 ntBASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Gm19221-201ENSMUST00000221827 1477 ntBASIC18.06■□□□□ 0.48
Puf60Q3UEB3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm13875-201ENSMUST00000120162 282 ntBASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm2546-201ENSMUST00000182630 991 ntBASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Puf60Q3UEB3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Daam2-202ENSMUST00000224595 1926 ntBASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Gm12715-201ENSMUST00000121430 1128 ntBASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.04■□□□□ 0.48
Puf60Q3UEB3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms