Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm10731-201ENSMUST00000181171 448 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm11989-201ENSMUST00000117240 672 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm11362-201ENSMUST00000118838 850 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm5863-201ENSMUST00000121760 1008 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm5778-201ENSMUST00000171003 1072 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpm1Q2TV84 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.33■□□□□ 0.53
Trpm1Q2TV84 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trpm1Q2TV84 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trpm1Q2TV84 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpm1Q2TV84 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Gm9463-201ENSMUST00000206707 601 ntBASIC18.33■□□□□ 0.52
Trpm1Q2TV84 AC153505.1-201ENSMUST00000218819 1071 ntBASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trpm1Q2TV84 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm1Q2TV84 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpm1Q2TV84 Gm12795-201ENSMUST00000117594 539 ntBASIC18.31■□□□□ 0.52
Trpm1Q2TV84 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms