Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm13809-201ENSMUST00000117921 597 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm13019-201ENSMUST00000120000 276 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm12403-201ENSMUST00000121384 959 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm26957-201ENSMUST00000182645 977 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm270-201ENSMUST00000223010 976 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm6304-201ENSMUST00000096579 447 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm24845-201ENSMUST00000158034 109 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm43969-201ENSMUST00000204833 535 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.74□□□□□ -0.53
Chd8Q09XV5 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd8Q09XV5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Daam2-202ENSMUST00000224595 1926 ntBASIC11.73□□□□□ -0.53
Chd8Q09XV5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.73□□□□□ -0.53
Chd8Q09XV5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms