Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CiitaP79621 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CiitaP79621 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CiitaP79621 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.33□□□□□ -0.12
CiitaP79621 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.33□□□□□ -0.12
CiitaP79621 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CiitaP79621 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.33□□□□□ -0.12
CiitaP79621 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.33□□□□□ -0.12
CiitaP79621 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CiitaP79621 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CiitaP79621 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CiitaP79621 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CiitaP79621 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
CiitaP79621 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CiitaP79621 Mir686-201ENSMUST00000102174 109 ntBASIC14.32□□□□□ -0.12
CiitaP79621 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.32□□□□□ -0.12
CiitaP79621 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Gm25927-201ENSMUST00000175058 117 ntBASIC14.32□□□□□ -0.12
CiitaP79621 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.32□□□□□ -0.12
CiitaP79621 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.32□□□□□ -0.12
CiitaP79621 Gm19184-201ENSMUST00000196798 928 ntBASIC14.32□□□□□ -0.12
CiitaP79621 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CiitaP79621 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.32□□□□□ -0.12
CiitaP79621 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CiitaP79621 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.32□□□□□ -0.12
CiitaP79621 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.32□□□□□ -0.12
CiitaP79621 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CiitaP79621 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.31□□□□□ -0.12
CiitaP79621 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CiitaP79621 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CiitaP79621 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CiitaP79621 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CiitaP79621 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CiitaP79621 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CiitaP79621 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms