Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC21.23■□□□□ 0.99
Cux2P70298 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 AC169511.2-201ENSMUST00000226674 2063 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cux2P70298 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cux2P70298 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC21.23■□□□□ 0.99
Cux2P70298 Gm22138-201ENSMUST00000158748 128 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC21.23■□□□□ 0.99
Cux2P70298 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Gm270-201ENSMUST00000223010 976 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Gm21998-201ENSMUST00000117552 1308 ntBASIC21.23■□□□□ 0.99
Cux2P70298 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cux2P70298 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cux2P70298 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC21.22■□□□□ 0.99
Cux2P70298 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Mup-ps26-201ENSMUST00000121751 202 ntBASIC21.22■□□□□ 0.99
Cux2P70298 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Cux2P70298 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Gm27530-201ENSMUST00000184096 98 ntBASIC21.22■□□□□ 0.99
Cux2P70298 Gm42682-201ENSMUST00000198349 1265 ntBASIC21.22■□□□□ 0.99
Cux2P70298 Gm43962-201ENSMUST00000203898 190 ntBASIC21.22■□□□□ 0.99
Cux2P70298 Gm45398-201ENSMUST00000210561 165 ntBASIC21.22■□□□□ 0.99
Cux2P70298 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cux2P70298 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cux2P70298 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC21.22■□□□□ 0.99
Cux2P70298 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cux2P70298 Gm9387-201ENSMUST00000098624 1320 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC21.21■□□□□ 0.99
Cux2P70298 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cux2P70298 Gm18974-201ENSMUST00000221478 1031 ntBASIC21.21■□□□□ 0.99
Cux2P70298 AC154176.1-201ENSMUST00000225897 220 ntBASIC21.21■□□□□ 0.99
Cux2P70298 CT030637.1-201ENSMUST00000228016 669 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Gm10076-201ENSMUST00000073238 384 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cux2P70298 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC21.21■□□□□ 0.99
Cux2P70298 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Gm12899-201ENSMUST00000120565 551 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC21.21■□□□□ 0.99
Cux2P70298 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Gm25881-201ENSMUST00000157783 103 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cux2P70298 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Cux2P70298 Gm42937-201ENSMUST00000197360 752 ntBASIC21.21■□□□□ 0.99
Cux2P70298 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC21.21■□□□□ 0.99
Cux2P70298 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 AC153505.1-201ENSMUST00000218819 1071 ntBASIC21.21■□□□□ 0.99
Cux2P70298 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cux2P70298 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cux2P70298 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cux2P70298 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 Gm38355-201ENSMUST00000192514 1570 ntBASIC21.2■□□□□ 0.98
Cux2P70298 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC21.2■□□□□ 0.98
Cux2P70298 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Cux2P70298 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cux2P70298 Gm5733-201ENSMUST00000190232 939 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms