Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm42550-201ENSMUST00000201553 960 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.06□□□□□ -0.64
Pdlim4P70271 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.06□□□□□ -0.64
Pdlim4P70271 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm38223-201ENSMUST00000194484 695 ntBASIC11.05□□□□□ -0.64
Pdlim4P70271 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.05□□□□□ -0.64
Pdlim4P70271 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gm6180-201ENSMUST00000065243 498 ntBASIC11.05□□□□□ -0.64
Pdlim4P70271 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pdlim4P70271 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pdlim4P70271 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm11918-201ENSMUST00000121660 179 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms