Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.41□□□□□ -0.42
Six5P70178 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Six5P70178 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six5P70178 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Six5P70178 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.41□□□□□ -0.42
Six5P70178 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.41□□□□□ -0.42
Six5P70178 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.41□□□□□ -0.42
Six5P70178 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Six5P70178 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.41□□□□□ -0.42
Six5P70178 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.41□□□□□ -0.42
Six5P70178 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.41□□□□□ -0.42
Six5P70178 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six5P70178 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.41□□□□□ -0.42
Six5P70178 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six5P70178 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Gm12928-201ENSMUST00000117115 573 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm14928-201ENSMUST00000120198 477 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.4□□□□□ -0.42
Six5P70178 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Gm6152-201ENSMUST00000151704 340 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm23984-201ENSMUST00000157139 203 ntBASIC12.4□□□□□ -0.42
Six5P70178 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Six5P70178 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.4□□□□□ -0.42
Six5P70178 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.4□□□□□ -0.42
Six5P70178 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.4□□□□□ -0.42
Six5P70178 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.4□□□□□ -0.42
Six5P70178 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.4□□□□□ -0.42
Six5P70178 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.4□□□□□ -0.42
Six5P70178 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.4□□□□□ -0.42
Six5P70178 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.4□□□□□ -0.42
Six5P70178 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Six5P70178 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six5P70178 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Six5P70178 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six5P70178 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Six5P70178 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Six5P70178 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.4□□□□□ -0.43
Six5P70178 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Six5P70178 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Six5P70178 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six5P70178 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms