Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ThraP63058 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ThraP63058 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ThraP63058 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
ThraP63058 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ThraP63058 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.43□□□□□ -0.26
ThraP63058 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
ThraP63058 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.43□□□□□ -0.26
ThraP63058 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ThraP63058 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.43□□□□□ -0.26
ThraP63058 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ThraP63058 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ThraP63058 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ThraP63058 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ThraP63058 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ThraP63058 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ThraP63058 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.42□□□□□ -0.26
ThraP63058 Gm13385-201ENSMUST00000121089 220 ntBASIC13.42□□□□□ -0.26
ThraP63058 Mir1894-201ENSMUST00000122802 81 ntBASIC13.42□□□□□ -0.26
ThraP63058 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.42□□□□□ -0.26
ThraP63058 Gm6244-201ENSMUST00000178732 841 ntBASIC13.42□□□□□ -0.26
ThraP63058 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ThraP63058 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ThraP63058 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ThraP63058 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.42□□□□□ -0.26
ThraP63058 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ThraP63058 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.41□□□□□ -0.26
ThraP63058 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.41□□□□□ -0.26
ThraP63058 Rubie-203ENSMUST00000227803 2430 ntBASIC13.41□□□□□ -0.26
ThraP63058 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.41□□□□□ -0.26
ThraP63058 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.41□□□□□ -0.26
ThraP63058 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
ThraP63058 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ThraP63058 Gm11524-201ENSMUST00000119349 807 ntBASIC13.41□□□□□ -0.26
ThraP63058 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.41□□□□□ -0.26
ThraP63058 Gm11425-201ENSMUST00000119608 498 ntBASIC13.41□□□□□ -0.26
ThraP63058 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.41□□□□□ -0.26
ThraP63058 Gm2495-201ENSMUST00000191160 466 ntBASIC13.41□□□□□ -0.26
ThraP63058 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ThraP63058 Gm19078-201ENSMUST00000206311 727 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms