Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lhx1P63006 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13□□□□□ -0.33
Lhx1P63006 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lhx1P63006 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13□□□□□ -0.33
Lhx1P63006 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13□□□□□ -0.33
Lhx1P63006 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Gm8805-201ENSMUST00000117848 313 ntBASIC13□□□□□ -0.33
Lhx1P63006 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13□□□□□ -0.33
Lhx1P63006 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13□□□□□ -0.33
Lhx1P63006 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13□□□□□ -0.33
Lhx1P63006 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Gm10268-201ENSMUST00000085340 555 ntBASIC13□□□□□ -0.33
Lhx1P63006 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Lhx1P63006 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx1P63006 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Lhx1P63006 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Gm11978-201ENSMUST00000122315 466 ntBASIC12.99□□□□□ -0.33
Lhx1P63006 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Gm27682-201ENSMUST00000183930 110 ntBASIC12.99□□□□□ -0.33
Lhx1P63006 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Gm6458-201ENSMUST00000211573 635 ntBASIC12.99□□□□□ -0.33
Lhx1P63006 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lhx1P63006 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lhx1P63006 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lhx1P63006 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx1P63006 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx1P63006 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.98□□□□□ -0.33
Lhx1P63006 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm12957-201ENSMUST00000117835 377 ntBASIC12.98□□□□□ -0.33
Lhx1P63006 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx1P63006 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.98□□□□□ -0.33
Lhx1P63006 Gm28693-202ENSMUST00000190758 331 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms