Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.55□□□□□ -0.24
Ybx1P62960 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ybx1P62960 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.55□□□□□ -0.24
Ybx1P62960 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.55□□□□□ -0.24
Ybx1P62960 Gm7046-201ENSMUST00000221351 977 ntBASIC13.55□□□□□ -0.24
Ybx1P62960 Gm19163-201ENSMUST00000223313 780 ntBASIC13.55□□□□□ -0.24
Ybx1P62960 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ybx1P62960 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ybx1P62960 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ybx1P62960 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.54□□□□□ -0.24
Ybx1P62960 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm4986-201ENSMUST00000119731 549 ntBASIC13.54□□□□□ -0.24
Ybx1P62960 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.54□□□□□ -0.24
Ybx1P62960 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm37489-201ENSMUST00000191883 159 ntBASIC13.54□□□□□ -0.24
Ybx1P62960 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.54□□□□□ -0.24
Ybx1P62960 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.54□□□□□ -0.24
Ybx1P62960 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ybx1P62960 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.54□□□□□ -0.24
Ybx1P62960 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ybx1P62960 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.54□□□□□ -0.24
Ybx1P62960 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ybx1P62960 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.53□□□□□ -0.24
Ybx1P62960 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ybx1P62960 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.53□□□□□ -0.24
Ybx1P62960 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms