Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Rpl39P62892 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rpl39P62892 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rpl39P62892 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rpl39P62892 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Gm12260-201ENSMUST00000122447 411 ntBASIC9.43□□□□□ -0.9
Rpl39P62892 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.43□□□□□ -0.9
Rpl39P62892 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Rprl2-201ENSMUST00000157150 290 ntBASIC9.43□□□□□ -0.9
Rpl39P62892 Gm9719-201ENSMUST00000162765 543 ntBASIC9.43□□□□□ -0.9
Rpl39P62892 Gm18733-201ENSMUST00000173950 856 ntBASIC9.43□□□□□ -0.9
Rpl39P62892 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Rpl39P62892 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rpl39P62892 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Rpl39P62892 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Gm15770-201ENSMUST00000117498 584 ntBASIC9.42□□□□□ -0.9
Rpl39P62892 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.42□□□□□ -0.9
Rpl39P62892 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.42□□□□□ -0.9
Rpl39P62892 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Rpl39P62892 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Gm33320-201ENSMUST00000192232 530 ntBASIC9.42□□□□□ -0.9
Rpl39P62892 Gm45612-201ENSMUST00000211320 160 ntBASIC9.42□□□□□ -0.9
Rpl39P62892 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.42□□□□□ -0.9
Rpl39P62892 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rpl39P62892 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.42□□□□□ -0.9
Rpl39P62892 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms