Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Lsm5P62322 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Mir125a-201ENSMUST00000083545 68 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Lsm5P62322 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.01□□□□□ -0.65
Lsm5P62322 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.01□□□□□ -0.65
Lsm5P62322 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm5P62322 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Lsm5P62322 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lsm5P62322 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm5P62322 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lsm5P62322 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Gm6211-201ENSMUST00000147973 4275 ntBASIC11□□□□□ -0.65
Lsm5P62322 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11□□□□□ -0.65
Lsm5P62322 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11□□□□□ -0.65
Lsm5P62322 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lsm5P62322 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Gm7229-201ENSMUST00000214719 1007 ntBASIC11□□□□□ -0.65
Lsm5P62322 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11□□□□□ -0.65
Lsm5P62322 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11□□□□□ -0.65
Lsm5P62322 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Lsm5P62322 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Lsm5P62322 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11□□□□□ -0.65
Lsm5P62322 Gm43273-201ENSMUST00000199649 2594 ntBASIC11□□□□□ -0.65
Lsm5P62322 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11□□□□□ -0.65
Lsm5P62322 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Lsm5P62322 Gm43075-201ENSMUST00000198613 3905 ntBASIC11□□□□□ -0.65
Lsm5P62322 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm5P62322 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11□□□□□ -0.65
Lsm5P62322 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Lsm5P62322 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Lsm5P62322 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.99□□□□□ -0.65
Lsm5P62322 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Lsm5P62322 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Lsm5P62322 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.99□□□□□ -0.65
Lsm5P62322 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.99□□□□□ -0.65
Lsm5P62322 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms