Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.48□□□□□ -0.89
Cks1bP61025 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cks1bP61025 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cks1bP61025 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1bP61025 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Cks1bP61025 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.47□□□□□ -0.89
Cks1bP61025 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.47□□□□□ -0.89
Cks1bP61025 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm5864-201ENSMUST00000202263 970 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cks1bP61025 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cks1bP61025 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm15889-202ENSMUST00000212669 2443 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cks1bP61025 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.47□□□□□ -0.89
Cks1bP61025 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Cks1bP61025 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Cks1bP61025 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.46□□□□□ -0.89
Cks1bP61025 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Cks1bP61025 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Cks1bP61025 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Cks1bP61025 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.46□□□□□ -0.89
Cks1bP61025 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1bP61025 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Gm16198-201ENSMUST00000118766 670 ntBASIC9.46□□□□□ -0.9
Cks1bP61025 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cks1bP61025 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.46□□□□□ -0.9
Cks1bP61025 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1bP61025 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1bP61025 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms