Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.52□□□□□ -0.41
Nup43P59235 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup43P59235 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Nup43P59235 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nup43P59235 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.52□□□□□ -0.41
Nup43P59235 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup43P59235 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nup43P59235 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.51□□□□□ -0.41
Nup43P59235 Gm5745-201ENSMUST00000183748 313 ntBASIC12.51□□□□□ -0.41
Nup43P59235 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Grk6-205ENSMUST00000224653 2976 ntBASIC12.51□□□□□ -0.41
Nup43P59235 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nup43P59235 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nup43P59235 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup43P59235 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nup43P59235 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nup43P59235 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.5□□□□□ -0.41
Nup43P59235 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.5□□□□□ -0.41
Nup43P59235 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nup43P59235 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.5□□□□□ -0.41
Nup43P59235 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nup43P59235 Mir7221-201ENSMUST00000184009 72 ntBASIC12.5□□□□□ -0.41
Nup43P59235 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.5□□□□□ -0.41
Nup43P59235 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.5□□□□□ -0.41
Nup43P59235 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.5□□□□□ -0.41
Nup43P59235 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm16372-201ENSMUST00000073088 450 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms