Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.78□□□□□ -0.04
Tpm1P58771 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tpm1P58771 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tpm1P58771 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tpm1P58771 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tpm1P58771 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.77□□□□□ -0.04
Tpm1P58771 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.77□□□□□ -0.04
Tpm1P58771 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tpm1P58771 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.77□□□□□ -0.05
Tpm1P58771 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.77□□□□□ -0.05
Tpm1P58771 Gm15653-201ENSMUST00000119247 907 ntBASIC14.77□□□□□ -0.05
Tpm1P58771 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Gm24158-201ENSMUST00000175263 71 ntBASIC14.77□□□□□ -0.05
Tpm1P58771 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.77□□□□□ -0.05
Tpm1P58771 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.77□□□□□ -0.05
Tpm1P58771 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tpm1P58771 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tpm1P58771 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tpm1P58771 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.77□□□□□ -0.05
Tpm1P58771 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Tpm1P58771 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.77□□□□□ -0.05
Tpm1P58771 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tpm1P58771 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tpm1P58771 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Tpm1P58771 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Tpm1P58771 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Tpm1P58771 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Gm24420-201ENSMUST00000176676 59 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Tpm1P58771 Gm29541-201ENSMUST00000191351 678 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.76□□□□□ -0.05
Tpm1P58771 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm1P58771 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Tpm1P58771 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Gm15678-201ENSMUST00000117573 960 ntBASIC14.75□□□□□ -0.05
Tpm1P58771 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
Tpm1P58771 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tpm1P58771 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.75□□□□□ -0.05
Tpm1P58771 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm1P58771 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.75□□□□□ -0.05
Tpm1P58771 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tpm1P58771 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Tpm1P58771 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Tpm1P58771 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.75□□□□□ -0.05
Tpm1P58771 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.75□□□□□ -0.05
Tpm1P58771 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms