Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PmchP56942 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
PmchP56942 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.82□□□□□ -0.68
PmchP56942 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
PmchP56942 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.82□□□□□ -0.68
PmchP56942 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.82□□□□□ -0.68
PmchP56942 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.82□□□□□ -0.68
PmchP56942 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.82□□□□□ -0.68
PmchP56942 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.82□□□□□ -0.68
PmchP56942 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PmchP56942 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.82□□□□□ -0.68
PmchP56942 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PmchP56942 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PmchP56942 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PmchP56942 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.81□□□□□ -0.68
PmchP56942 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
PmchP56942 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.81□□□□□ -0.68
PmchP56942 Gm13015-201ENSMUST00000118674 204 ntBASIC10.81□□□□□ -0.68
PmchP56942 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Gm9824-201ENSMUST00000178707 561 ntBASIC10.81□□□□□ -0.68
PmchP56942 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.81□□□□□ -0.68
PmchP56942 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.81□□□□□ -0.68
PmchP56942 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Gm18206-201ENSMUST00000207027 926 ntBASIC10.81□□□□□ -0.68
PmchP56942 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.81□□□□□ -0.68
PmchP56942 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Mir497b-201ENSMUST00000093601 125 ntBASIC10.81□□□□□ -0.68
PmchP56942 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.81□□□□□ -0.68
PmchP56942 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PmchP56942 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
PmchP56942 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.8□□□□□ -0.68
PmchP56942 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
PmchP56942 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms