Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Fdft1P53798 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.26□□□□□ -0.29
Fdft1P53798 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Gm22189-201ENSMUST00000103822 86 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.25□□□□□ -0.29
Fdft1P53798 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.25□□□□□ -0.29
Fdft1P53798 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Fdft1P53798 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Gm42612-201ENSMUST00000197986 623 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Gm43170-201ENSMUST00000199827 612 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Fdft1P53798 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.25□□□□□ -0.29
Fdft1P53798 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Fdft1P53798 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.24□□□□□ -0.29
Fdft1P53798 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.24□□□□□ -0.29
Fdft1P53798 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Fdft1P53798 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Fdft1P53798 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Fdft1P53798 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.24□□□□□ -0.29
Fdft1P53798 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm17330-201ENSMUST00000221047 165 ntBASIC13.24□□□□□ -0.29
Fdft1P53798 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.24□□□□□ -0.29
Fdft1P53798 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Fdft1P53798 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fdft1P53798 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.23□□□□□ -0.29
Fdft1P53798 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fdft1P53798 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms