Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.81□□□□□ -0.36
Lbx1P52955 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lbx1P52955 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Gm13296-201ENSMUST00000117854 997 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.81□□□□□ -0.36
Lbx1P52955 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.81□□□□□ -0.36
Lbx1P52955 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lbx1P52955 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lbx1P52955 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lbx1P52955 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lbx1P52955 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Lbx1P52955 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lbx1P52955 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lbx1P52955 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lbx1P52955 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.8□□□□□ -0.36
Lbx1P52955 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.8□□□□□ -0.36
Lbx1P52955 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.8□□□□□ -0.36
Lbx1P52955 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lbx1P52955 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lbx1P52955 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Lbx1P52955 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.79□□□□□ -0.36
Lbx1P52955 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lbx1P52955 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.79□□□□□ -0.36
Lbx1P52955 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.79□□□□□ -0.36
Lbx1P52955 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.79□□□□□ -0.36
Lbx1P52955 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lbx1P52955 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.79□□□□□ -0.36
Lbx1P52955 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.79□□□□□ -0.36
Lbx1P52955 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms