Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.41□□□□□ -0.26
Lhx3P50481 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.41□□□□□ -0.26
Lhx3P50481 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.41□□□□□ -0.26
Lhx3P50481 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx3P50481 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx3P50481 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.4□□□□□ -0.26
Lhx3P50481 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Lhx3P50481 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.4□□□□□ -0.26
Lhx3P50481 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.4□□□□□ -0.26
Lhx3P50481 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.4□□□□□ -0.26
Lhx3P50481 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.4□□□□□ -0.26
Lhx3P50481 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.4□□□□□ -0.26
Lhx3P50481 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx3P50481 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx3P50481 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lhx3P50481 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lhx3P50481 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx3P50481 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lhx3P50481 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.39□□□□□ -0.27
Lhx3P50481 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Lhx3P50481 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Gm1335-201ENSMUST00000121653 386 ntBASIC13.39□□□□□ -0.27
Lhx3P50481 Gm2231-201ENSMUST00000125661 612 ntBASIC13.39□□□□□ -0.27
Lhx3P50481 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx3P50481 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Gm26927-201ENSMUST00000182385 965 ntBASIC13.39□□□□□ -0.27
Lhx3P50481 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx3P50481 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lhx3P50481 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.39□□□□□ -0.27
Lhx3P50481 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lhx3P50481 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx3P50481 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx3P50481 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lhx3P50481 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx3P50481 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms