Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.57■□□□□ 0.08
LtbrP50284 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LtbrP50284 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LtbrP50284 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.57■□□□□ 0.08
LtbrP50284 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.57■□□□□ 0.08
LtbrP50284 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.57■□□□□ 0.08
LtbrP50284 Gm18212-201ENSMUST00000211678 889 ntBASIC15.57■□□□□ 0.08
LtbrP50284 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 Gm8959-201ENSMUST00000213150 571 ntBASIC15.57■□□□□ 0.08
LtbrP50284 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LtbrP50284 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LtbrP50284 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LtbrP50284 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.57■□□□□ 0.08
LtbrP50284 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.56■□□□□ 0.08
LtbrP50284 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LtbrP50284 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.56■□□□□ 0.08
LtbrP50284 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LtbrP50284 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LtbrP50284 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LtbrP50284 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.56■□□□□ 0.08
LtbrP50284 Gm13123-201ENSMUST00000122173 492 ntBASIC15.56■□□□□ 0.08
LtbrP50284 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Gm2445-201ENSMUST00000182798 989 ntBASIC15.56■□□□□ 0.08
LtbrP50284 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.56■□□□□ 0.08
LtbrP50284 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.56■□□□□ 0.08
LtbrP50284 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.56■□□□□ 0.08
LtbrP50284 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LtbrP50284 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LtbrP50284 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.56■□□□□ 0.08
LtbrP50284 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
LtbrP50284 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LtbrP50284 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.56■□□□□ 0.08
LtbrP50284 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.56■□□□□ 0.08
LtbrP50284 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LtbrP50284 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LtbrP50284 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
LtbrP50284 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
LtbrP50284 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC15.55■□□□□ 0.08
LtbrP50284 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.55■□□□□ 0.08
LtbrP50284 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.55■□□□□ 0.08
LtbrP50284 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.55■□□□□ 0.08
LtbrP50284 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LtbrP50284 Gm3890-201ENSMUST00000182416 207 ntBASIC15.55■□□□□ 0.08
LtbrP50284 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LtbrP50284 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms