Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Gm4995-201ENSMUST00000117247 432 ntBASIC10.97□□□□□ -0.65
Nkx2-1P50220 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.97□□□□□ -0.65
Nkx2-1P50220 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.97□□□□□ -0.65
Nkx2-1P50220 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.97□□□□□ -0.65
Nkx2-1P50220 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-1P50220 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-1P50220 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.96□□□□□ -0.65
Nkx2-1P50220 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gm43125-201ENSMUST00000201724 730 ntBASIC10.96□□□□□ -0.65
Nkx2-1P50220 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-1P50220 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-1P50220 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms