Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.59□□□□□ -0.07
Brca1P48754 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Brca1P48754 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.59□□□□□ -0.07
Brca1P48754 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brca1P48754 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brca1P48754 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Brca1P48754 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.58□□□□□ -0.07
Brca1P48754 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.58□□□□□ -0.08
Brca1P48754 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Brca1P48754 Gm13315-201ENSMUST00000120376 991 ntBASIC14.58□□□□□ -0.08
Brca1P48754 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.58□□□□□ -0.08
Brca1P48754 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.58□□□□□ -0.08
Brca1P48754 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.58□□□□□ -0.08
Brca1P48754 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Brca1P48754 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Brca1P48754 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.57□□□□□ -0.08
Brca1P48754 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Brca1P48754 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.57□□□□□ -0.08
Brca1P48754 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.57□□□□□ -0.08
Brca1P48754 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.57□□□□□ -0.08
Brca1P48754 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.57□□□□□ -0.08
Brca1P48754 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.57□□□□□ -0.08
Brca1P48754 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.57□□□□□ -0.08
Brca1P48754 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Brca1P48754 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Brca1P48754 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Brca1P48754 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Brca1P48754 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.57□□□□□ -0.08
Brca1P48754 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Brca1P48754 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Brca1P48754 Gm45925-201ENSMUST00000218882 744 ntBASIC14.57□□□□□ -0.08
Brca1P48754 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Gm14921-201ENSMUST00000118643 908 ntBASIC14.56□□□□□ -0.08
Brca1P48754 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Mir6546-201ENSMUST00000184460 62 ntBASIC14.56□□□□□ -0.08
Brca1P48754 Gm43916-201ENSMUST00000205062 967 ntBASIC14.56□□□□□ -0.08
Brca1P48754 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Brca1P48754 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.56□□□□□ -0.08
Brca1P48754 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.55□□□□□ -0.08
Brca1P48754 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Brca1P48754 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms