Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps4bP46467 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps4bP46467 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps4bP46467 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps4bP46467 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Vps4bP46467 Gm7488-201ENSMUST00000117148 684 ntBASIC13.47□□□□□ -0.25
Vps4bP46467 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps4bP46467 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps4bP46467 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.47□□□□□ -0.25
Vps4bP46467 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.47□□□□□ -0.25
Vps4bP46467 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps4bP46467 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps4bP46467 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.46□□□□□ -0.25
Vps4bP46467 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps4bP46467 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps4bP46467 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps4bP46467 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.46□□□□□ -0.25
Vps4bP46467 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Gm21854-201ENSMUST00000179901 471 ntBASIC13.46□□□□□ -0.25
Vps4bP46467 Gm27838-201ENSMUST00000184829 128 ntBASIC13.46□□□□□ -0.25
Vps4bP46467 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.46□□□□□ -0.25
Vps4bP46467 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Vps4bP46467 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Vps4bP46467 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps4bP46467 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps4bP46467 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Vps4bP46467 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps4bP46467 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps4bP46467 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vps4bP46467 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.45□□□□□ -0.26
Vps4bP46467 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps4bP46467 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Gm5279-201ENSMUST00000199575 745 ntBASIC13.45□□□□□ -0.26
Vps4bP46467 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.45□□□□□ -0.26
Vps4bP46467 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Gm9794-201ENSMUST00000202370 423 ntBASIC13.45□□□□□ -0.26
Vps4bP46467 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps4bP46467 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms