Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.54□□□□□ -0.4
Cdx2P43241 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.54□□□□□ -0.4
Cdx2P43241 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Cdx2P43241 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdx2P43241 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdx2P43241 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.53□□□□□ -0.4
Cdx2P43241 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.53□□□□□ -0.4
Cdx2P43241 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.53□□□□□ -0.4
Cdx2P43241 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdx2P43241 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdx2P43241 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdx2P43241 Nsd1-205ENSMUST00000224693 852 ntBASIC12.53□□□□□ -0.4
Cdx2P43241 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdx2P43241 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.53□□□□□ -0.4
Cdx2P43241 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdx2P43241 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdx2P43241 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdx2P43241 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Cdx2P43241 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdx2P43241 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx2P43241 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.52□□□□□ -0.4
Cdx2P43241 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.52□□□□□ -0.4
Cdx2P43241 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.52□□□□□ -0.4
Cdx2P43241 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdx2P43241 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx2P43241 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Gm23270-201ENSMUST00000104055 131 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Snord83b-201ENSMUST00000104546 94 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.52□□□□□ -0.41
Cdx2P43241 Gm2260-201ENSMUST00000184965 657 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Gm44967-201ENSMUST00000207047 631 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdx2P43241 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cdx2P43241 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Cdx2P43241 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdx2P43241 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.52□□□□□ -0.41
Cdx2P43241 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms