Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VhlP40338 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VhlP40338 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.89□□□□□ -0.67
VhlP40338 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VhlP40338 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.89□□□□□ -0.67
VhlP40338 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.89□□□□□ -0.67
VhlP40338 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VhlP40338 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VhlP40338 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.88□□□□□ -0.67
VhlP40338 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.88□□□□□ -0.67
VhlP40338 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VhlP40338 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.88□□□□□ -0.67
VhlP40338 Mir1897-201ENSMUST00000122581 272 ntBASIC10.88□□□□□ -0.67
VhlP40338 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.88□□□□□ -0.67
VhlP40338 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm24158-201ENSMUST00000175263 71 ntBASIC10.88□□□□□ -0.67
VhlP40338 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VhlP40338 Gm17330-201ENSMUST00000221047 165 ntBASIC10.88□□□□□ -0.67
VhlP40338 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.88□□□□□ -0.67
VhlP40338 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
VhlP40338 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VhlP40338 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.88□□□□□ -0.67
VhlP40338 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.88□□□□□ -0.67
VhlP40338 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
VhlP40338 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VhlP40338 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VhlP40338 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
VhlP40338 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.87□□□□□ -0.67
VhlP40338 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.87□□□□□ -0.67
VhlP40338 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VhlP40338 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.87□□□□□ -0.67
VhlP40338 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VhlP40338 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.87□□□□□ -0.67
VhlP40338 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.86□□□□□ -0.67
VhlP40338 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VhlP40338 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VhlP40338 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.86□□□□□ -0.67
VhlP40338 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VhlP40338 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VhlP40338 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms