Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PtprkP35822 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC20.68■□□□□ 0.9
PtprkP35822 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC20.68■□□□□ 0.9
PtprkP35822 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PtprkP35822 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PtprkP35822 Rprl1-202ENSMUST00000198476 238 ntBASIC20.68■□□□□ 0.9
PtprkP35822 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
PtprkP35822 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.68■□□□□ 0.9
PtprkP35822 AC159103.1-201ENSMUST00000228325 429 ntBASIC20.68■□□□□ 0.9
PtprkP35822 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PtprkP35822 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC20.68■□□□□ 0.9
PtprkP35822 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PtprkP35822 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PtprkP35822 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PtprkP35822 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PtprkP35822 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
PtprkP35822 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PtprkP35822 Rn7s6-201ENSMUST00000175005 291 ntBASIC20.67■□□□□ 0.9
PtprkP35822 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.67■□□□□ 0.9
PtprkP35822 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.67■□□□□ 0.9
PtprkP35822 AC132901.1-201ENSMUST00000224345 508 ntBASIC20.67■□□□□ 0.9
PtprkP35822 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC20.67■□□□□ 0.9
PtprkP35822 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC20.67■□□□□ 0.9
PtprkP35822 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PtprkP35822 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC20.66■□□□□ 0.9
PtprkP35822 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PtprkP35822 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC20.66■□□□□ 0.9
PtprkP35822 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PtprkP35822 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC20.66■□□□□ 0.9
PtprkP35822 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PtprkP35822 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC20.65■□□□□ 0.9
PtprkP35822 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
PtprkP35822 Gm12795-201ENSMUST00000117594 539 ntBASIC20.65■□□□□ 0.9
PtprkP35822 Gm13888-201ENSMUST00000119148 422 ntBASIC20.65■□□□□ 0.9
PtprkP35822 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Gm19931-201ENSMUST00000198920 368 ntBASIC20.65■□□□□ 0.9
PtprkP35822 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PtprkP35822 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Gm45433-201ENSMUST00000209386 247 ntBASIC20.65■□□□□ 0.9
PtprkP35822 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC20.65■□□□□ 0.9
PtprkP35822 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PtprkP35822 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PtprkP35822 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PtprkP35822 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PtprkP35822 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PtprkP35822 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PtprkP35822 Gm9025-201ENSMUST00000122415 1575 ntBASIC20.64■□□□□ 0.9
PtprkP35822 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PtprkP35822 AC113060.1-201ENSMUST00000225689 1573 ntBASIC20.64■□□□□ 0.9
PtprkP35822 Gm13315-201ENSMUST00000120376 991 ntBASIC20.64■□□□□ 0.89
PtprkP35822 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC20.64■□□□□ 0.89
PtprkP35822 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC20.64■□□□□ 0.89
PtprkP35822 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC20.64■□□□□ 0.89
PtprkP35822 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PtprkP35822 Gm29155-201ENSMUST00000185910 269 ntBASIC20.64■□□□□ 0.89
PtprkP35822 Gm38210-201ENSMUST00000191944 809 ntBASIC20.64■□□□□ 0.89
PtprkP35822 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms