Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.96□□□□□ -0.17
Rfc1P35601 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rfc1P35601 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rfc1P35601 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.96□□□□□ -0.17
Rfc1P35601 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Rfc1P35601 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.96□□□□□ -0.17
Rfc1P35601 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Rfc1P35601 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.96□□□□□ -0.18
Rfc1P35601 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfc1P35601 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.95□□□□□ -0.18
Rfc1P35601 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.95□□□□□ -0.18
Rfc1P35601 Mir6990-201ENSMUST00000183724 91 ntBASIC13.95□□□□□ -0.18
Rfc1P35601 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.95□□□□□ -0.18
Rfc1P35601 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfc1P35601 BC001981-202ENSMUST00000191393 1545 ntBASIC13.95□□□□□ -0.18
Rfc1P35601 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Rfc1P35601 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfc1P35601 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfc1P35601 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rfc1P35601 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfc1P35601 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Gm13823-201ENSMUST00000119930 345 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfc1P35601 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfc1P35601 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfc1P35601 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfc1P35601 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfc1P35601 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rfc1P35601 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Rfc1P35601 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms