Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.13□□□□□ -0.15
Mmp3P28862 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.13□□□□□ -0.15
Mmp3P28862 Gm12241-201ENSMUST00000118330 726 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 Gm13350-201ENSMUST00000120519 479 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.13□□□□□ -0.15
Mmp3P28862 Gm43758-201ENSMUST00000199500 367 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 Gm18584-201ENSMUST00000203098 964 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 Gm7783-201ENSMUST00000204795 781 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 Gm32025-201ENSMUST00000217960 307 ntBASIC14.13□□□□□ -0.15
Mmp3P28862 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Mmp3P28862 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Mmp3P28862 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.13□□□□□ -0.15
Mmp3P28862 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.12□□□□□ -0.15
Mmp3P28862 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.12□□□□□ -0.15
Mmp3P28862 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Mir7221-201ENSMUST00000184009 72 ntBASIC14.12□□□□□ -0.15
Mmp3P28862 Gm44364-201ENSMUST00000198368 141 ntBASIC14.12□□□□□ -0.15
Mmp3P28862 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.12□□□□□ -0.15
Mmp3P28862 Gm8227-201ENSMUST00000223306 571 ntBASIC14.12□□□□□ -0.15
Mmp3P28862 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Mmp3P28862 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp3P28862 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp3P28862 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp3P28862 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mmp3P28862 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Mmp3P28862 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp3P28862 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Mmp3P28862 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.11□□□□□ -0.15
Mmp3P28862 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.11□□□□□ -0.15
Mmp3P28862 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Gm15370-201ENSMUST00000117158 253 ntBASIC14.11□□□□□ -0.15
Mmp3P28862 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.11□□□□□ -0.15
Mmp3P28862 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Mmp3P28862 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Gm45865-201ENSMUST00000211815 945 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms