Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Gm13392-201ENSMUST00000117708 150 ntBASIC11.05□□□□□ -0.64
Col8a2P25318 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.05□□□□□ -0.64
Col8a2P25318 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Gm37424-201ENSMUST00000191727 561 ntBASIC11.05□□□□□ -0.64
Col8a2P25318 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.05□□□□□ -0.64
Col8a2P25318 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.05□□□□□ -0.64
Col8a2P25318 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a2P25318 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a2P25318 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.04□□□□□ -0.64
Col8a2P25318 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.04□□□□□ -0.64
Col8a2P25318 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm8213-201ENSMUST00000118191 441 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Gm1335-201ENSMUST00000121653 386 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.04□□□□□ -0.64
Col8a2P25318 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm44069-201ENSMUST00000204898 506 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col8a2P25318 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.04□□□□□ -0.64
Col8a2P25318 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms