Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Clk1P22518 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.43□□□□□ -0.42
Clk1P22518 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Grk6-205ENSMUST00000224653 2976 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Clk1P22518 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clk1P22518 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clk1P22518 Gm22189-201ENSMUST00000103822 86 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.42□□□□□ -0.42
Clk1P22518 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.42□□□□□ -0.42
Clk1P22518 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clk1P22518 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Gm5279-201ENSMUST00000199575 745 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.42□□□□□ -0.42
Clk1P22518 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Gm18165-201ENSMUST00000217426 928 ntBASIC12.42□□□□□ -0.42
Clk1P22518 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.42□□□□□ -0.42
Clk1P22518 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Gm9797-201ENSMUST00000052902 613 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clk1P22518 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.42□□□□□ -0.42
Clk1P22518 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clk1P22518 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.42□□□□□ -0.42
Clk1P22518 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Clk1P22518 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clk1P22518 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clk1P22518 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.41□□□□□ -0.42
Clk1P22518 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.41□□□□□ -0.42
Clk1P22518 Gm19220-201ENSMUST00000222682 803 ntBASIC12.41□□□□□ -0.42
Clk1P22518 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.41□□□□□ -0.42
Clk1P22518 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms