Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccl3P10855 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ccl3P10855 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccl3P10855 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccl3P10855 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccl3P10855 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ccl3P10855 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ccl3P10855 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.65□□□□□ -0.55
Ccl3P10855 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccl3P10855 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Ccl3P10855 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ccl3P10855 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ccl3P10855 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccl3P10855 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccl3P10855 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.64□□□□□ -0.55
Ccl3P10855 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.64□□□□□ -0.55
Ccl3P10855 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.64□□□□□ -0.55
Ccl3P10855 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.64□□□□□ -0.55
Ccl3P10855 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Ccl3P10855 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.64□□□□□ -0.55
Ccl3P10855 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.64□□□□□ -0.55
Ccl3P10855 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ccl3P10855 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl3P10855 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.63□□□□□ -0.55
Ccl3P10855 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm14017-201ENSMUST00000121934 386 ntBASIC11.63□□□□□ -0.55
Ccl3P10855 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccl3P10855 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccl3P10855 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.63□□□□□ -0.55
Ccl3P10855 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccl3P10855 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ccl3P10855 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms