Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Igh-VJ558P01758 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igh-VJ558P01758 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igh-VJ558P01758 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igh-VJ558P01758 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igh-VJ558P01758 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Gm14350-201ENSMUST00000116642 640 ntBASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igh-VJ558P01758 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Igh-VJ558P01758 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms