Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.64□□□□□ -0.55
NgfP01139 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NgfP01139 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.63□□□□□ -0.55
NgfP01139 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.63□□□□□ -0.55
NgfP01139 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.63□□□□□ -0.55
NgfP01139 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.63□□□□□ -0.55
NgfP01139 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NgfP01139 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.63□□□□□ -0.55
NgfP01139 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Gm14704-201ENSMUST00000120300 874 ntBASIC11.63□□□□□ -0.55
NgfP01139 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.63□□□□□ -0.55
NgfP01139 Gm18827-201ENSMUST00000188341 790 ntBASIC11.63□□□□□ -0.55
NgfP01139 Gm37466-201ENSMUST00000195692 652 ntBASIC11.63□□□□□ -0.55
NgfP01139 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.63□□□□□ -0.55
NgfP01139 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.63□□□□□ -0.55
NgfP01139 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.63□□□□□ -0.55
NgfP01139 Gm30285-201ENSMUST00000214614 422 ntBASIC11.63□□□□□ -0.55
NgfP01139 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
NgfP01139 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
NgfP01139 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NgfP01139 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
NgfP01139 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.62□□□□□ -0.55
NgfP01139 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Mir874-201ENSMUST00000104769 76 ntBASIC11.62□□□□□ -0.55
NgfP01139 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.62□□□□□ -0.55
NgfP01139 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
NgfP01139 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.62□□□□□ -0.55
NgfP01139 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.62□□□□□ -0.55
NgfP01139 Gm26956-201ENSMUST00000182176 986 ntBASIC11.62□□□□□ -0.55
NgfP01139 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.62□□□□□ -0.55
NgfP01139 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.62□□□□□ -0.55
NgfP01139 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.62□□□□□ -0.55
NgfP01139 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.62□□□□□ -0.55
NgfP01139 Mir433-201ENSMUST00000093564 124 ntBASIC11.62□□□□□ -0.55
NgfP01139 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
NgfP01139 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.62□□□□□ -0.55
NgfP01139 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
NgfP01139 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
NgfP01139 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NgfP01139 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms