Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Gm44891-201ENSMUST00000208817 2223 ntBASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcf11G3X9Z4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Gm11930-201ENSMUST00000117788 190 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Gm11597-201ENSMUST00000121423 964 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 AC138604.1-201ENSMUST00000226969 739 ntBASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcf11G3X9Z4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Gm44401-201ENSMUST00000204462 2375 ntBASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Mir6927-201ENSMUST00000184494 71 ntBASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcf11G3X9Z4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms