Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.62□□□□□ -0.23
Atf6F6VAN0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.62□□□□□ -0.23
Atf6F6VAN0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.61□□□□□ -0.23
Atf6F6VAN0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm26315-201ENSMUST00000083890 321 ntBASIC13.61□□□□□ -0.23
Atf6F6VAN0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf6F6VAN0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.6□□□□□ -0.23
Atf6F6VAN0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf6F6VAN0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms