Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gm10268-201ENSMUST00000085340 555 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb9E9Q5G2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm11637-201ENSMUST00000120601 592 ntBASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Snora78-201ENSMUST00000158630 128 ntBASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm19931-201ENSMUST00000198920 368 ntBASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm6458-201ENSMUST00000211573 635 ntBASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb9E9Q5G2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb9E9Q5G2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm37424-201ENSMUST00000191727 561 ntBASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms