Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm5878E9PUB3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm13223-201ENSMUST00000118609 747 ntBASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm5878E9PUB3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gm12485-201ENSMUST00000119641 291 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gm21854-201ENSMUST00000179901 471 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gm9723-201ENSMUST00000192100 457 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gm37234-201ENSMUST00000193259 1441 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm5878E9PUB3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Gm5878E9PUB3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms