Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gm11127A7VMS2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm24543-201ENSMUST00000103867 82 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm6415-201ENSMUST00000118488 348 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm2445-201ENSMUST00000182798 989 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm37714-201ENSMUST00000194742 342 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm6916-202ENSMUST00000205523 195 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm11127A7VMS2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm11127A7VMS2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms