Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Mir7221-201ENSMUST00000184009 72 ntBASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ighv1-11A0A0A6YWI9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms