Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Gm45930-201ENSMUST00000221330 292 ntBASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm29396-201ENSMUST00000185659 716 ntBASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Scn8aQ9WTU3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn8aQ9WTU3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms