Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Gm8515-201ENSMUST00000194852 576 ntBASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim3Q9R1R2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gm23984-201ENSMUST00000157139 203 ntBASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.51□□□□□ -0.41
Trim3Q9R1R2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gm9794-201ENSMUST00000202370 423 ntBASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.51□□□□□ -0.41
Trim3Q9R1R2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim3Q9R1R2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.51□□□□□ -0.41
Trim3Q9R1R2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.5□□□□□ -0.41
Trim3Q9R1R2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim3Q9R1R2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms