Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.98□□□□□ -0.33
Atp6ap1Q9R1Q9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.97□□□□□ -0.33
Atp6ap1Q9R1Q9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms