Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SrfQ9JM73 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SrfQ9JM73 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SrfQ9JM73 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.52□□□□□ -0.4
SrfQ9JM73 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SrfQ9JM73 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.52□□□□□ -0.41
SrfQ9JM73 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC12.52□□□□□ -0.41
SrfQ9JM73 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm32025-201ENSMUST00000217960 307 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.52□□□□□ -0.41
SrfQ9JM73 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SrfQ9JM73 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SrfQ9JM73 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm15276-201ENSMUST00000145953 498 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm9520-201ENSMUST00000209460 1253 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm5904-201ENSMUST00000210286 865 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.51□□□□□ -0.41
SrfQ9JM73 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SrfQ9JM73 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SrfQ9JM73 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SrfQ9JM73 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms