Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm15240-201ENSMUST00000118156 720 ntBASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a2Q9JLR1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.97□□□□□ -0.49
Sec61a2Q9JLR1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms