Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm12928-201ENSMUST00000117115 573 ntBASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rtp4Q9ER80 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rtp4Q9ER80 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Mir698-201ENSMUST00000102164 109 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm17794-201ENSMUST00000220252 955 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rtp4Q9ER80 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms